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Items: 1 to 20 of 556

1.

Experimental tests strongly challenge the evidence of a healthy human blood microbiome

(Submitter supplied) The study critically evaluate the results of 16S targeted amplicon sequencing performed on the total DNA collected from healthy donors’ blood samples in the light of specific negative controls.
Organism:
Escherichia coli; Mus musculus; human blood metagenome
Type:
Other
Platforms:
GPL16085 GPL34159 GPL16417
15 Samples
Download data: FASTA, TSV, TXT
Series
Accession:
GSE254843
ID:
200254843
2.

Changes in bacterial diversity and composition detected in plasma determine immunological outcome in HIV+ persons initiating antiretroviral therapy

(Submitter supplied) The impact of the microbiome on HIV disease is widely acknowledged although the mechanisms downstream of fluctuations in microbial composition remain speculative. We detected rapid, dynamic changes in translocated microbial constituents during two years after cART initiation. An unbiased systems biology approach revealed two distinct pathways driven by changes in the abundance ratio of Serratia to other bacterial genera. more...
Organism:
human blood metagenome; Homo sapiens
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL30076 GPL20301
514 Samples
Download data: XLSX
Series
Accession:
GSE172557
ID:
200172557
3.

Total RNA Sequencing reveals microbial communities in human blood and disease specific effects

(Submitter supplied) An increasing body of evidence suggests an important role of the human microbiome in health and disease. We propose a ‘lost and found’ pipeline, which examines high quality unmapped sequence reads for microbial taxonomic classification. Using this pipeline, we are able to detect bacterial and archaeal phyla in blood using RNA sequencing (RNA-Seq) data. Careful analyses, including the use of positive and negative control datasets, suggest that these detected phyla represent true microbial communities in whole blood and are not due to contaminants. more...
Organism:
human blood metagenome
Type:
Other
Platform:
GPL21801
192 Samples
Download data: FASTQ
Series
Accession:
GSE80974
ID:
200080974
4.

Illumina MiSeq (human blood metagenome)

Organism:
human blood metagenome
1 Series
11 Samples
Download data
Platform
Accession:
GPL34159
ID:
100034159
5.

Illumina HiSeq 4000 (human blood metagenome)

Organism:
human blood metagenome
1 Series
347 Samples
Download data
Platform
Accession:
GPL30076
ID:
100030076
6.

Illumina Hiseq 2000 (human blood metagenome)

Organism:
human blood metagenome
1 Series
192 Samples
Download data
Platform
Accession:
GPL21801
ID:
100021801
7.

Reads obtained from sequencing of sample Blood11

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058762
ID:
308058762
8.

Reads obtained from sequencing of sample Blood8

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058761
ID:
308058761
9.

Reads obtained from sequencing of sample Blood10

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058759
ID:
308058759
10.

Reads obtained from sequencing of sample Blood9

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058758
ID:
308058758
11.

Reads obtained from sequencing of sample Blood7

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058757
ID:
308058757
12.

Reads obtained from sequencing of sample Blood6

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058756
ID:
308058756
13.

Reads obtained from sequencing of sample Blood4

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058755
ID:
308058755
14.

Reads obtained from sequencing of sample Blood2

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058754
ID:
308058754
15.

Reads obtained from sequencing of sample Blood5

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058753
ID:
308058753
16.

Reads obtained from sequencing of sample Blood3

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058752
ID:
308058752
17.

Reads obtained from sequencing of sample Blood1

Organism:
human blood metagenome
Source name:
Blood
Platform:
GPL34159
Series:
GSE254843
Download data
Sample
Accession:
GSM8058751
ID:
308058751
18.

DNA_YD1417

Organism:
human blood metagenome
Source name:
Plasma
Platform:
GPL30076
Series:
GSE172557
Download data
Sample
Accession:
GSM5281414
ID:
305281414
19.

DNA_VB115_2

Organism:
human blood metagenome
Source name:
Plasma
Platform:
GPL30076
Series:
GSE172557
Download data
Sample
Accession:
GSM5281413
ID:
305281413
20.

DNA_SV1296

Organism:
human blood metagenome
Source name:
Plasma
Platform:
GPL30076
Series:
GSE172557
Download data
Sample
Accession:
GSM5281412
ID:
305281412
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db=gds|term=txid1504969[Organism:noexp]|query=1|qty=5|blobid=MCID_661b7323e3fccf293785273a|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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