GEO DataSets

(Submitter supplied) (i) To determine the inhibitory effect of Luvangetin against Fusarium verticillioides and fumonisins production in vitro and in vivo, and (ii) to investigate the mode of action of Luvangetin against Fusarium verticillioides by transcriptomics and proteomics analysis.

Organism:

Fusarium verticillioides

Type:

Expression profiling by high throughput sequencing

Platform:

GPL33920

6 Samples

Download data: TXT

(Submitter supplied) Fusarium verticillioides is one of the most important pathogens of maize, causing rots and producing fumonisin mycotoxins during infection. Ingestion of fumonisin-contaminated corn causes underperformance and even fatal toxicity in livestock and is associated with neural tube birth defects, growth stunting in children and some cancers. StuA, an APSES class transcription factor, is commonly a major developmental transcriptional regulator in fungi. more...

Organism:

Fusarium verticillioides

Type:

Expression profiling by high throughput sequencing

Platform:

GPL25477

12 Samples

Download data: TXT

(Submitter supplied) Transcriptomic data collected from cultures of Fusarium verticillioides six hours post-exposure to Bacillus mojavensis RRC101 lipopeptides (surfactins, fengycins, combined treatment)

Organism:

Fusarium verticillioides

Type:

Expression profiling by high throughput sequencing

Platform:

GPL25583

12 Samples

Download data: XLSX

(Submitter supplied) We performed a systematic computational network-based analysis of large-scale F. verticillioides RNA-seq datasets to identify gene subnetwork modules associated with virulence and fumonisin regulation.

Organism:

Fusarium verticillioides

Type:

Expression profiling by high throughput sequencing

Platform:

GPL19800

107 Samples

Download data: TXT

(Submitter supplied) Investigation of whole transcriptional changes in F. verticillioides wild-type (WT) strain FRC M-3125 and gene deletion strain ΔFVEG_10494-6.4 when treated with and without 1.5 mM diethylenetriamine (DETA) NONOate for 30 min, with three biological replicates each. DETA NONOate is a NO-donor molecule.

Organism:

Fusarium verticillioides

Type:

Expression profiling by high throughput sequencing

Platform:

GPL25477

12 Samples

Download data: TXT

(Submitter supplied) Investigation of whole transcriptional changes in F. verticillioides FRC M-3125 when exposed to 5 μg/ml pyrrocidine A (PA), 20 μg/ml pyrrocidine B (PB), 50 μg/ml 2-benzoxazolinone (BOA), 50 μg/ml 2-oxindole (OXD), 50 μg/ml 2-coumaranone (CMN), or 50 μg/ml chlorzoxazone (CZX). Cultures were harvested one hour after exposure. Assessed in reference to control cultures of M-3125 exposed to DMSO (0.5% final concentration) since all the above compounds were dissolved in DMSO.

Organism:

Fusarium verticillioides

Type:

Expression profiling by high throughput sequencing

Platform:

GPL19800

21 Samples

Download data: TXT

(Submitter supplied) Using RNA-Seq datasets, we identified subnetwork modules (group of genes) and key functional (hub) genes associated with the fungal pathogenicity by developing a computational pipeline with network-based comparative analusis approach

Organism:

Fusarium verticillioides; Zea mays

Type:

Expression profiling by high throughput sequencing

Platform:

GPL24415

36 Samples

Download data: TXT

(Submitter supplied) Investigation of whole genome gene expression level changes in F. verticillioides M3125 when exposed to 1.5 mM DETA NONOate for 30 minutes. Assessed in reference to unexposed M3125. DETA NONOate is a nitric oxide (NO) donor with a half-life of approximately 56 hours at 27°C, pH 7.4, to liberate 2 moles of NO per mole of parent compound.

Organism:

Fusarium verticillioides

Type:

Expression profiling by array

Platform:

GPL14669

4 Samples

Download data: CALLS

(Submitter supplied) Investigation of whole genome gene expression level changes in F. verticillioides FRC M-3125 when exposed to 50 ug/ml 2-benzoxazolinone (BOA). Cultures were harvested two hours after exposure. Assessed in reference to control cultures of M-3125 exposed to ethanol (1% final concentration) since BOA was dissolved in ethanol.

Organism:

Fusarium verticillioides

Type:

Expression profiling by array

Platform:

GPL14669

4 Samples

Download data: CALLS

(Submitter supplied) An gene-expression comparison of the wild type and strain delta-fst1 of Fusarium verticillioides grown on autoclaved maize kernels for six days was conducted.

Organism:

Fusarium verticillioides

Type:

Expression profiling by high throughput sequencing

Platform:

GPL19800

8 Samples

Download data: XLSX

(Submitter supplied) Fusarium graminearum and F. verticillioides are devastating cereal pathogens with very different life history and ecological characteristics. F. graminearum is homothallic, and sexual spores are an important component of its life cycle, responsible for disease initiation. F. verticilloides is heterothallic, and produces only modest numbers of fruiting bodies, which are not a significant source of inoculum. more...

Organism:

Fusarium verticillioides; Fusarium graminearum

Type:

Expression profiling by high throughput sequencing

Platforms:

GPL19248 GPL19247

12 Samples

Download data: TXT

(Submitter supplied) Investigation of whole genome expression changes induced by SGE1 30 minutes after induction of SGE1 expression in an SGE1 mutant strain of Fusarium verticillioides. Comparison between wild-type, SGE1 overexpression mutant GMTcp-272 (xlnp:SGE1 in SGE1 mutant background) and sge1 mutant in liquid medium (18 hrs) after induction with xylose. SGE1 plays a role in pathogenicity and synthesis of secondary metabolism.

Organism:

Fusarium verticillioides

Type:

Expression profiling by array

Platform:

GPL14669

9 Samples

Download data: PAIR

(Submitter supplied) Investigation of whole genome gene expression level changes after 6 days growth of Fusarium verticillioides wild-type and LAE1 deletion mutant in liquid fumonisin inducing media (GYAM) Fusarium verticillioides produces a polyketide derived mycotoxin, fumonsin, over time in liquid media, Proctor et al, Co-expression of 15 contiguous genes delineates a fumonisin biosynthetic gene cluster in Gibberella moniliformis, Fungal Genetics and Biology, 38:237-249.

Organism:

Fusarium verticillioides

Type:

Expression profiling by array

Platform:

GPL14669

6 Samples

Download data: CALLS, PAIR

(Submitter supplied) Investigation of whole genome gene expression level changes over time of Fusarium verticillioides wild-type in liquid fumonisin inducing media (GYAM) Fusarium verticillioides produces a polyketide derived mycotoxin, fumonsin, over time in liquid media, Proctor et al, Co-expression of 15 contiguous genes delineates a fumonisin biosynthetic gene cluster in Gibberella moniliformis, Fungal Genetics and Biology, 38:237-249

Organism:

Fusarium verticillioides

Type:

Expression profiling by array

Platform:

GPL5623

4 Samples

Download data: FTR

(Submitter supplied) Investigation of whole genome gene expression level differences of Fusarium fujikuroi between wild-type and a Ffvel1 (velvet) deletion mutant in liquid medium with minimal nitrogen between 24 hr, 72 hr and 120 hr of growth using an array based on a F. verticillioides gene call set. Fusarium fujikuroi produces a number of secondary metabolites including gibberellins, bikaverin, fumonisin and fusarin C that are influenced by nitrogen availability and the velvet global regulatory complex.

Organism:

Fusarium verticillioides; Fusarium fujikuroi

Type:

Expression profiling by array

Platform:

GPL8781

12 Samples

Download data: TXT

(Submitter supplied) Mycotoxins are secondary metabolites which are produced by numerous fungi and pose a continuous challenge to the safety and quality of food commodities in South Africa. These toxins have toxicologically relevant effects on humans and animals that eat contaminated foods. In this study, a diagnostic DNA microarray was developed for the identification of the most common food-borne fungi, as well as the genes leading to toxin production. more...

Organism:

Aspergillus amstelodami; Aspergillus parasiticus; Fusarium sambucinum; Curvularia lunata; Fusarium; Talaromyces funiculosus; Bipolaris sorokiniana; Fusarium decemcellulare; Drechslera sp.; Aspergillus chevalieri; Aspergillus; Aspergillus clavatus; Fusarium oxysporum; Fusarium acuminatum; Talaromyces islandicus; Aspergillus versicolor; Penicillium fellutanum; Fusarium globosum; Pseudopithomyces chartarum; Aspergillus niger; Penicillium; Fusarium sporotrichioides; Fusarium graminearum; Penicillium expansum; Fusarium sp.; Fusarium avenaceum; Penicillium italicum; Aspergillus carbonarius; Fusarium anthophilum; Fusarium equiseti; Claviceps purpurea; Alternaria alternata; Aspergillus multicolor; Fusarium subglutinans; Fusarium cerealis; Penicillium viridicatum; Penicillium corylophilum; Fusarium verticillioides; Talaromyces rugulosus; Fusarium solani; Stenocarpella maydis; Fusarium incarnatum

Type:

Expression profiling by array; Other

Platform:

GPL9730

120 Samples

Download data: GPR, TXT

(Submitter supplied) Investigation of whole genome gene expression level changes over time of Fusarium verticillioides wild-type in liquid fumonisin inducing media (GYAM). Fusarium verticillioides produces a polyketide derived mycotoxin, fumonsin, over time in liquid media (Proctor et al, Co-expression of 15 contiguous genes delineates a fumonisin biosynthetic gene cluster in Gibberella moniliformis, Fungal Genetics and Biology, 38:237-249).

Organism:

Fusarium verticillioides

Type:

Expression profiling by array

Platform:

GPL8781

12 Samples

Download data: TXT

(Submitter supplied) Genome-wide search for AreA-dependent and -independent nitrogen-regulated genes in Fusarium fujikuroi by cross-species hybridization with F. verticillioides microarrays. Keywords: glutamine treatmet

Organism:

Fusarium fujikuroi; Fusarium verticillioides

Type:

Expression profiling by array

Platform:

GPL5623

8 Samples

Download data: FTR

(Submitter supplied) F. verticillioides cultured on dissected maize tissues. Keywords: Differential gene expression

Organism:

Fusarium verticillioides

Type:

Expression profiling by array

Platform:

GPL5623

4 Samples

Download data: FTR

(Submitter supplied) In the study, expression profiles in wild type and a fcc1 mutant were compared to identify genes with patterns of expression similar to the FUM genes. DNA microarrays were constructed with ESTs from cDNA libraries obtained from the fcc1 mutant and wild-type strain of F. verticillioides grown on maize kernels . By microarray methodology, gene expression was measured in the fcc1 mutant and the wild type during growth on maize and in a synthetic medium at pH 3 and 8. more...

Organism:

Fusarium verticillioides

Type:

Expression profiling by array

Platform:

GPL790

18 Samples

Download data