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Items: 1 to 20 of 28

1.

Transcriptome analysis using RNA sequencing of three endemic Myrtaceae species from New Caledonia displaying contrasting responses to myrtle rust (Austropuccinia psidii)

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Arillastrum gummiferum; Tristaniopsis glauca; Syzygium longifolium
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL24254 GPL24255 GPL24253
48 Samples
Download data
Series
Accession:
GSE106750
ID:
200106750
2.

Transcriptome analysis using RNA sequencing of three endemic Myrtaceae species from New Caledonia displaying contrasting responses to myrtle rust (Austropuccinia psidii) [TRIGL-FAR-EUCGR]

(Submitter supplied) Finding predictive molecular markers for resistance against Myrtle rust may help to identify resistant plants and provide a means of maintaining Myrtaceae production in nursery, especially for ecosystems restoration purposes. Sequence polymorphism involving in differentiate expressed genes are particularly relevant for disease resistance marker design. We sequenced the transcriptomes of resistant and susceptible individuals of three endemic host species: Arillastrum gummiferum, Tristaniopsis glauca and Syzygium longifolium. more...
Organism:
Tristaniopsis glauca
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24254
5 Samples
Download data: TSV, TXT
Series
Accession:
GSE106746
ID:
200106746
3.

Transcriptome analysis using RNA sequencing of three endemic Myrtaceae species from New Caledonia displaying contrasting responses to myrtle rust (Austropuccinia psidii) [TRIGL-FAR-DENOVO]

(Submitter supplied) Finding predictive molecular markers for resistance against Myrtle rust may help to identify resistant plants and provide a means of maintaining Myrtaceae production in nursery, especially for ecosystems restoration purposes. Sequence polymorphism involving in differentiate expressed genes are particularly relevant for disease resistance marker design. We sequenced the transcriptomes of resistant and susceptible individuals of three endemic host species: Arillastrum gummiferum, Tristaniopsis glauca and Syzygium longifolium. more...
Organism:
Tristaniopsis glauca
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24254
5 Samples
Download data: FAA, FNA, GFF3, TSV, TXT
Series
Accession:
GSE106741
ID:
200106741
4.

Transcriptome analysis using RNA sequencing of three endemic Myrtaceae species from New Caledonia displaying contrasting responses to myrtle rust (Austropuccinia psidii) [TRIGL-BDS-EUCGR]

(Submitter supplied) Finding predictive molecular markers for resistance against Myrtle rust may help to identify resistant plants and provide a means of maintaining Myrtaceae production in nursery, especially for ecosystems restoration purposes. Sequence polymorphism involving in differentiate expressed genes are particularly relevant for disease resistance marker design. We sequenced the transcriptomes of resistant and susceptible individuals of three endemic host species: Arillastrum gummiferum, Tristaniopsis glauca and Syzygium longifolium. more...
Organism:
Tristaniopsis glauca
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24254
6 Samples
Download data: TSV, TXT
Series
Accession:
GSE106740
ID:
200106740
5.

Transcriptome analysis using RNA sequencing of three endemic Myrtaceae species from New Caledonia displaying contrasting responses to myrtle rust (Austropuccinia psidii) [TRIGL-BDS-DENOVO]

(Submitter supplied) Finding predictive molecular markers for resistance against Myrtle rust may help to identify resistant plants and provide a means of maintaining Myrtaceae production in nursery, especially for ecosystems restoration purposes. Sequence polymorphism involving in differentiate expressed genes are particularly relevant for disease resistance marker design. We sequenced the transcriptomes of resistant and susceptible individuals of three endemic host species: Arillastrum gummiferum, Tristaniopsis glauca and Syzygium longifolium. more...
Organism:
Tristaniopsis glauca
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24254
6 Samples
Download data: FAA, FNA, GFF3, TSV, TXT
Series
Accession:
GSE106738
ID:
200106738
6.

Illumina HiSeq 2500 (Tristaniopsis glauca)

Organism:
Tristaniopsis glauca
5 Series
22 Samples
Download data
Platform
Accession:
GPL24254
ID:
100024254
7.

Tg6 (TRIGL-FAR-EUCGR)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106746 GSE106750
Download data
Sample
Accession:
GSM2849812
ID:
302849812
8.

Tg5 (TRIGL-FAR-EUCGR)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106746 GSE106750
Download data
Sample
Accession:
GSM2849811
ID:
302849811
9.

Tg4 (TRIGL-FAR-EUCGR)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106746 GSE106750
Download data
Sample
Accession:
GSM2849810
ID:
302849810
10.

Tg3 (TRIGL-FAR-EUCGR)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106746 GSE106750
Download data
Sample
Accession:
GSM2849809
ID:
302849809
11.

Tg2 (TRIGL-FAR-EUCGR)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106746 GSE106750
Download data
Sample
Accession:
GSM2849808
ID:
302849808
12.

Tg6 (TRIGL-FAR-DENOVO)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106741 GSE106750
Download data
Sample
Accession:
GSM2849745
ID:
302849745
13.

Tg5 (TRIGL-FAR-DENOVO)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106741 GSE106750
Download data
Sample
Accession:
GSM2849744
ID:
302849744
14.

Tg4 (TRIGL-FAR-DENOVO)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106741 GSE106750
Download data
Sample
Accession:
GSM2849743
ID:
302849743
15.

Tg3 (TRIGL-FAR-DENOVO)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106741 GSE106750
Download data
Sample
Accession:
GSM2849742
ID:
302849742
16.

Tg2 (TRIGL-FAR-DENOVO)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106741 GSE106750
Download data
Sample
Accession:
GSM2849741
ID:
302849741
17.

V7 (TRIGL-BDS-EUCGR)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106740 GSE106750
Download data
Sample
Accession:
GSM2849740
ID:
302849740
18.

V6 (TRIGL-BDS-EUCGR)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106740 GSE106750
Download data
Sample
Accession:
GSM2849739
ID:
302849739
19.

V4 (TRIGL-BDS-EUCGR)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106740 GSE106750
Download data
Sample
Accession:
GSM2849738
ID:
302849738
20.

V3 (TRIGL-BDS-EUCGR)

Organism:
Tristaniopsis glauca
Source name:
leaf
Platform:
GPL24254
Series:
GSE106740 GSE106750
Download data
Sample
Accession:
GSM2849737
ID:
302849737
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db=gds|term=txid106072[Organism:exp]|query=1|qty=4|blobid=MCID_667ad83e8c5d4760e2265d46|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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