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Items: 4

1.

Differential analysis of gene regulation at transcript resolution by RNA-Seq

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array; Expression profiling by high throughput sequencing
Platforms:
GPL15520 GPL11154 GPL13607
18 Samples
Download data: TXT
Series
Accession:
GSE37704
ID:
200037704
2.

Differential analysis of HOXA1 in adult cells at isoform resolution by RNA-Seq [Illumina]

(Submitter supplied) High-throughput RNA sequencing (RNA-Seq) has enabled accurate gene discovery and expression estimation, but robust differential analysis of gene and transcript abundances has proven difficult. We present a new algorithm, implemented in the freely available tool Cuffdiff, which integrates transcript-level expression estimation with a method to control for variability across replicate samples. Cuffdiff robustly identifies differentially regulated isoforms and genes and reveals differential splicing or promoter-preference changes. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL15520 GPL11154
12 Samples
Download data: DIFF, FPKM_TRACKING, TXT
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

LFB_HOXA1KD_hiseq_repA

Organism:
Homo sapiens
Source name:
LFB_HOXA1KD_hiseq_repA
Platform:
GPL11154
Series:
GSE37703 GSE37704
Download data
Sample
Accession:
GSM925765
ID:
300925765
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