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Items: 4

1.

Differential analysis of gene regulation at transcript resolution by RNA-Seq

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array; Expression profiling by high throughput sequencing
Platforms:
GPL13607 GPL15520 GPL11154
18 Samples
Download data: TXT
Series
Accession:
GSE37704
ID:
200037704
2.

Differential analysis of HOXA1 in adult cells at isoform resolution by RNA-Seq [Agilent]

(Submitter supplied) High-throughput RNA sequencing (RNA-Seq) has enabled accurate gene discovery and expression estimation, but robust differential analysis of gene and transcript abundances has proven difficult. We present a new algorithm, implemented in the freely available tool Cuffdiff, which integrates transcript-level expression estimation with a method to control for variability across replicate samples. Cuffdiff robustly identifies differentially regulated isoforms and genes and reveals differential splicing or promoter-preference changes. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL13607
6 Samples
Download data: TXT
Series
Accession:
GSE37690
ID:
200037690
3.

Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version)

(Submitter supplied) SurePrint G3 Human GE 8x60K Microarray Arrays of this design have barcodes that begin with 16028004 or 2528004. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. more...
Organism:
Homo sapiens
233 Series
2 Related Platforms
3749 Samples
Download data: TXT
Platform
Accession:
GPL13607
ID:
100013607
4.

A1KD_2

Organism:
Homo sapiens
Source name:
HOXA1_knockdown_rep2
Platform:
GPL13607
Series:
GSE37690 GSE37704
Download data: TXT
Sample
Accession:
GSM925636
ID:
300925636
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