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Items: 4

1.

A comparative encyclopedia of DNA elements in the mouse genome

(Submitter supplied) The laboratory mouse shares the majority of its protein-coding genes with humans, making it the premier model organism in biomedical research, yet the two mammals differ in significant ways. To gain greater insights into both shared and species-specific transcriptional and cellular regulatory programs in the mouse, the Mouse ENCODE Consortium has mapped transcription, DNase I hypersensitivity, transcription factor binding, chromatin modifications and replication domains throughout the mouse genome in diverse cell and tissue types. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome variation profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing
8 related Platforms
588 Samples
Download data: BAM, BEDRNAELEMENTS, BIGWIG, BROADPEAK, NARROWPEAK, PAIR
Series
Accession:
GSE49847
ID:
200049847
2.

Transcription Factor Binding Sites by ChIP-seq from ENCODE/PSU

(Submitter supplied) This data was generated by ENCODE. If you have questions about the data, contact the submitting laboratory directly (Ross Hardison mailto:rch8@psu.edu). If you have questions about the Genome Browser track associated with this data, contact ENCODE (mailto:genome@soe.ucsc.edu). Rationale for the Mouse ENCODE project Our knowledge of the function of genomic DNA sequences comes from three basic approaches. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL13112 GPL9250
38 Samples
Download data: BIGWIG, BROADPEAK, TXT
Series
Accession:
GSE36029
ID:
200036029
3.

Illumina Genome Analyzer II (Mus musculus)

Platform
Accession:
GPL9250
ID:
100009250
4.

PSU_ChipSeq_MEL_Input

Organism:
Mus musculus
Source name:
MEL
Platform:
GPL9250
Series:
GSE36029 GSE49847
Download data: BIGWIG
Sample
Accession:
GSM923574
ID:
300923574
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