GSM8229173[Accession] - GEO DataSets

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Items: 3

Select item 2002657851.

Characterization of HBV and co-infection with HDV and HIV through spatial transcriptomics

(Submitter supplied) Background and aims: The intrahepatic processes associated with chronic hepatitis B (CHB), especially in the context of HDV and HIV co-infection, require a better understanding. Spatial transcriptomics can provide new insights into the complex intrahepatic biological processes, guiding new personalized treatments. Our aim is to evaluate this method to characterize the hepatic transcriptional landscape, cellular composition and biological pathways in liver biopsy samples from patients infected with HBV and HDV or HIV co-infection. more...

Organism:: Homo sapiens

Type:: Other

Platform:: GPL30991
37 Samples

Download data: DCC

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Accession:: GSE265785

ID:: 200265785

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000309912.

NanoString GeoMx Human Whole Transcriptome Atlas [do not use this platform, see NOTE below]

(Submitter supplied) Human RNA for Illumina Systems. RNA Probe set that targets 18,000+ transcripts for human protein-coding genes plus ERCC negative controls to profile the whole transcriptome. Excludes uninformative high expressing targets such as ribosomal subunits. Includes RNA probes designed for Illumina NGS readout with the Seq Code library prep. *** IMPORTANT NOTE ***: For NanoString GeoMx Digital Spatial Profiling studies with raw data in FASTQ format, please submit your study using GEO's high throughput sequence data submission instructions at: https://www.ncbi.nlm.nih.gov/geo/info/seq.html Protocol: See NanoString web site.