GSM8189829[Accession] - GEO DataSets - NCBI

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Items: 4

Select item 2002633411.

ChIP-seq, RNA-seq and BS-seq for WT and osino80

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Oryza sativa Japonica Group

Type:: Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing

Platforms:: GPL13834 GPL27860
75 Samples

Download data: BIGWIG, BW, COV

Series

Accession:: GSE263341

ID:: 200263341

Select item 2002254842.

ChIP-seq for OsINO80 location using YFP antibody, and ChIP-seq for WT and osino80 using H3, H2A, H2A.Z, H2Aub, H3K9me2, H3K4me2, H3K4me3, H3K27me3, and H3K36me3 antibodies

(Submitter supplied) To investigate the effect of the OsINO80, we analysed OsINO80 binding regions and analysed genome-wide H3, H2A, H2A.Z, H2Aub, H3K9me2, H3K4me2, H3K4me3, H3K27me3, and H3K36me3 in the mutant and WT by ChIP-seq.

Organism:: Oryza sativa Japonica Group

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL27860 GPL13834
61 Samples

Download data: BIGWIG

Series

Accession:: GSE225484

ID:: 200225484

Select item 1000278603.

Illumina NovaSeq 6000 (Oryza sativa Japonica Group)

Organism:: Oryza sativa Japonica Group

32 Series
442 Samples

Platform

Accession:: GPL27860

ID:: 100027860

Select item 3081898294.

osino80_H2A, ChIP-seq

Organism:: Oryza sativa Japonica Group

Source name:: 14-day-old seedlings

Platform:: GPL27860
Series:: GSE225484 GSE263341

Download data: BIGWIG

Sample

Accession:: GSM8189829

ID:: 308189829

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