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Items: 4

1.

Quantitative analysis of cis-regulatory elements in transcription with KAS-ATAC-seq [Mouse KAS-seq]

(Submitter supplied) Cis-regulatory elements (CREs) are pivotal in orchestrating gene expression throughout diverse biological systems. Accurate identification and in-depth characterization of functional CREs are crucial for decoding gene regulation network and dynamics during cellular processes. In this study, we developed a new KAS-seq (Opti-KAS-seq) procedure, with enhanced efficiency of capturing single-stranded DNA (ssDNA), broader genomic coverage, and adaptability to various sample types. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL24247 GPL19057 GPL16417
26 Samples
Download data: BED, BIGWIG
Series
Accession:
GSE256229
ID:
200256229

PubMed Full text in PMC Similar studies

2.

Quantitative analysis of cis-regulatory elements in transcription with KAS-ATAC-seq

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus; Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
5 related Platforms
67 Samples
Download data: BED, BIGWIG
Series
Accession:
GSE256232
ID:
200256232

PubMed Full text in PMC Similar studies

3.

Illumina MiSeq (Mus musculus)

Organism:
Mus musculus
934 Series
22104 Samples
Download data
Platform
Accession:
GPL16417
ID:
100016417

4.

mESC_opti-KAS-seq, rep1

Organism:
Mus musculus
Source name:
mESC
Platform:
GPL16417
Series:
GSE256229 GSE256232
Download data: BED, BIGWIG
Sample
Accession:
GSM8091606
ID:
308091606

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db=gds|term=GSM8091606[Accession]|query=1|qty=3|blobid=MCID_670c7a35475a635e85fd6808|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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