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Items: 3

1.

Single-cell TCR profiling of CSF and blood cells of PWH reveals persistent and shared infected T cell clones across tissue compartments even after ART

(Submitter supplied) The brain is a site of persistent infected cells during HIV infection. However, the dynamics of central nervous system (CNS) infection and T cell trafficking in people living with HIV (PWH) are incompletely understood. We profiled the single cell T cell repertoire and host transcriptome from paired blood and cerebrospinal fluid (CSF) from PWH and uninfected controls. We detected HIV RNA-producing cells in 8/11 (72.7 %) CSF samples and 6/11 (54.5 %) blood samples, with a higher frequency of infected single CD4 T cells in CSF than in blood. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Other
Platform:
GPL20301
82 Samples
Download data: CSV, H5, RDS, TAR
Series
Accession:
GSE243905
ID:
200243905
2.

Illumina HiSeq 4000 (Homo sapiens)

Platform
Accession:
GPL20301
ID:
100020301
3.

Control C4 CSF scTCRseq

Organism:
Homo sapiens
Source name:
CSF
Platform:
GPL20301
Series:
GSE243905
Download data: TAR
Sample
Accession:
GSM7798070
ID:
307798070
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db=gds|term=GSM7798070[Accession]|query=1|qty=2|blobid=MCID_678964e3f5211606906df3d2|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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