GSM657919[Accession] - GEO DataSets

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Items: 4

Select item 2000754541.

Transcript identification and quantification on Mouse Imprinted Region Tiling Array (MIRTA)

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Mus musculus

Type:: Non-coding RNA profiling by genome tiling array; Expression profiling by high throughput sequencing

Platforms:: GPL11618 GPL13112
62 Samples

Download data: BEDGRAPH, PAIR, TXT, WIG

Series

Accession:: GSE75454

ID:: 200075454

Analyze with GEO2R

Select item 2000267182.

Macro ncRNAs are abundant in imprinted regions and directly regulated by DNA methylation [tiling array]

(Submitter supplied) Imprinted macro ncRNAs such as Airn play an important role in silencing protein-coding genes in cis, macro ncRNAs could be a common feature in all imprinted gene clusters. By applying the RNA Expression on Tiling Array (RETA) technique, macro ncRNAs were found to be abundant in 26 known mouse genomic regions containing imprinted genes were detected. All well-known imprinted macro ncRNAs were up-regulated upon depletion of DNA methylation.

Organism:: Mus musculus

Type:: Non-coding RNA profiling by genome tiling array

Platform:: GPL11618
58 Samples

Download data: BEDGRAPH, PAIR, TXT, WIG

Series

Accession:: GSE26718

ID:: 200026718

Analyze with GEO2R

Select item 1000116183.

NimbleGen custom Mouse MIRTA Array

(Submitter supplied) Annotation in this record based on NCBI mouse build 37. Array build is based on potentially imprinted genes, 100nt spacing Protocol: see manufacturer's web site www.nimblegen.com