GSM611203[Accession] - GEO DataSets

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Items: 4

Select item 2000248431.

Tet1 and hydroxymethylcytosine in transcription and DNA methylation fidelity

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Expression profiling by array

Platforms:: GPL9185 GPL11078
32 Samples

Download data: BED, CEL

Series

Accession:: GSE24843

ID:: 200024843

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000248412.

Tet1 and hydroxymethylcytosine in transcription and DNA methylation fidelity (ChIP/DIP-Seq data)

(Submitter supplied) We analyzed the genome-wide binding of Tet1 in control (shScr) and Tet1 knockdown (shTet1) mouse ES cells using two different Tet1 antibodies (Tet1-C and Tet1-N). Furthermore, we generated genome-wide mapping of hydroxymethyl cytosine (hmC) and methyl cytosine (mC). We find that hmC, in contrast to mC, is also found at transcription start sites (TSSs), and that there is a significant overlap between Tet1 binding and hmC positive regions. more...