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Items: 3

1.

Uncovering the mesendoderm gene regulatory network through multi-omic data integration

(Submitter supplied) We report the ChIP-seq analysis of multiple Xenopus transcription factors binding. Also, we report loss-of-function transcriptomic analysis of Tcf7l1 by RNA-seq at different developmental stages. These newly generated datasets are analyzed using self-organizing maps, along with previously published Xenopus genomic data.
Organism:
Xenopus tropicalis
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL21875 GPL24898
19 Samples
Download data: NARROWPEAK, TXT
Series
Accession:
GSE161600
ID:
200161600

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina Genome Analyzer IIx (Xenopus tropicalis)

Organism:
Xenopus tropicalis
6 Series
78 Samples
Download data
Platform
Accession:
GPL24898
ID:
100024898

3.

Vegt stage 10 ChIP-seq

Organism:
Xenopus tropicalis
Source name:
Whole embryos
Platform:
GPL24898
Series:
GSE161600
Download data: NARROWPEAK
Sample
Accession:
GSM6077319
ID:
306077319

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db=gds|term=GSM6077319[Accession]|query=1|qty=2|blobid=MCID_6700133f75ef19692971614e|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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