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Items: 3

1.

Comprehensive array CGH of normal karyotype Myelodysplastic syndrome reveals hidden recurrent and individual genomic copy number aberrations with prognostic relevance

(Submitter supplied) About 40% of patients with myelodysplastic syndromes (MDS) present with a normal karyotype and they are facing different courses of disease. To advance the biological understanding and find molecular prognostic markers we performed a high resolution oligonucleotide array study of 107 MDS patients (FAB) with a normal karyotype. Recurrent hidden deletions overlapping with known cytogenetic aberrations or sites of known tumor associated genes were identified in 4q24 (TET2, 2x), 5q31.2 (2x), 7q22.1 (3x) and 21q22.12 (RUNX1, 2x). more...
Organism:
Homo sapiens
Type:
Genome variation profiling by array; Genome variation profiling by genome tiling array
5 related Platforms
107 Samples
Download data: TXT
Series
Accession:
GSE24602
ID:
200024602
2.

Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Feature Number version)

(Submitter supplied) SurePrint G3 Human CGH Microarray 4x180K Arrays of this design have barcodes that begin with 16022060 or 2522060. Data table annotations based on build hg18:NCBI36:Mar2006. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. more...
Organism:
Homo sapiens
88 Series
1 Related Platform
1333 Samples
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Platform
Accession:
GPL10123
ID:
100010123
3.

MDS tumor cells patient 21

Organism:
Homo sapiens
Source name:
MDS tumor cells, patient 21 (channel 1) control DNA (channel 2)
Platform:
GPL10123
Series:
GSE24602
Download data: TXT
Sample
Accession:
GSM606490
ID:
300606490
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