GSM5931559[Accession] - GEO DataSets

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Items: 4

Select item 2001978771.

Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Xenopus tropicalis; Xenopus tropicalis x Xenopus laevis; Xenopus laevis

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other

4 related Platforms
67 Samples

Download data: BW, COOL, HIC, TXT

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Accession:: GSE197877

ID:: 200197877

Select item 2001978732.

Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis [Hi-C]

(Submitter supplied) Vertebrate sperm genome differs from somatic cells and undergoes dramatic transformation after fertilization. However, the functional implications of the sperm genome structures have not been fully investigated. Here we show, in the sperms of Xenopus tropicalis, tens of genomic regions harbor multi-megabases, super-sized clustered loops (SSCLs) whose anchors are enriched with Helitrons, the only group of rolling-circle transposons. more...