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Items: 4

1.

In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation [ChIPmentation]

(Submitter supplied) Vertebrate genomes organize into topologically associating domains (TADs), delimited by boundaries that insulate regulatory elements from non-target genes. However, how boundary function is established is not well understood. Here, we combine genome-wide analyses and transgenic mouse assays to dissect the regulatory logic of clustered-CTCF boundaries in vivo, interrogating their function at multiple levels: chromatin interactions, transcription and phenotypes. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL19057
25 Samples
Download data: BW
Series
Accession:
GSE197629
ID:
200197629
2.

In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL19057 GPL24247 GPL21103
42 Samples
Download data: BW, HIC
Series
Accession:
GSE169561
ID:
200169561
3.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
4.

ChIP_Rad21_DistalLimb_E11-5_FALLinv_r2

Organism:
Mus musculus
Source name:
E11.5 distal limb buds
Platform:
GPL19057
Series:
GSE169561 GSE197629
Download data: BW
Sample
Accession:
GSM5924109
ID:
305924109
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db=gds|term=GSM5924109[Accession]|query=1|qty=2|blobid=MCID_670c8f40475a635e8500b170|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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