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Items: 3

1.

Epigenome and transcriptome of naive pluripotent mouse embryonic stem (ES) cells cultured in 2i serum-free medium

(Submitter supplied) This study describes the epigenetic and transcriptome profiling of mouse ES cells cultures in 2i serum-free medium. The proteins for which ChIP-Seq profiles were generated in these cells, as well as for cells grown in serum conditions, include H3K4me3, H3K36me3, H3K27me3, H3K9me3, Suz12 and Ezh2. A sequence profile of genomic DNA is also included. Furthermore, we included RNA-Seq of ds_cDNA synthesized from double poly(A) selected mRNA and from rRNA depleted (strand specific) total RNA.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing
Platform:
GPL11002
41 Samples
Download data: BED, WIG
Series
Accession:
GSE23943
ID:
200023943
2.

Illumina Genome Analyzer IIx (Mus musculus)

Platform
Accession:
GPL11002
ID:
100011002
3.

TNGA-serum_H3K27me3

Organism:
Mus musculus
Source name:
Embryonic Stem cells
Platform:
GPL11002
Series:
GSE23943
Download data: BED, WIG
Sample
Accession:
GSM590114
ID:
300590114
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db=gds|term=GSM590114[Accession]|query=1|qty=2|blobid=MCID_67a98614750a117a1d2c4cb2|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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