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Items: 3

1.

A dual-activity topoisomerase complex regulates mRNA translation and turnover

(Submitter supplied) Topoisomerase 3β (TOP3B) and TDRD3 form a dual-activity topoisomerase complex that interacts with FMRP and can change the topology of both DNA and RNA. Here, we investigated the post-transcriptional influence of TOP3B and associated proteins on mRNA translation and turnover. First, we discovered that in human HCT116 colon cancer cells, knock-out (KO) of TOP3B had similar effects on mRNA turnover and translation as did TDRD3-KO, while FMRP-KO resulted in rather distinct effects, indicating that TOP3B had stronger coordination with TDRD3 than FMRP in mRNA regulation. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL30173 GPL24676 GPL11154
62 Samples
Download data: BEDGRAPH
2.

Illumina NovaSeq 6000 (Homo sapiens)

Platform
Accession:
GPL24676
ID:
100024676
3.

set63.WT.3.Ribo-seq.rep1

Organism:
Homo sapiens
Source name:
human colorectal carcinoma cell line
Platform:
GPL24676
Series:
GSE188574
Download data: BEDGRAPH
Sample
Accession:
GSM5685784
ID:
305685784
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db=gds|term=GSM5685784[Accession]|query=1|qty=2|blobid=MCID_66e19b4d9fd03c7db37e501b|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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