GSM564953[Accession] - GEO DataSets

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Items: 4

Select item 2000228651.

CHAC1 mRNA expression is a strong prognostic biomarker in breast and ovarian cancer

(Submitter supplied) Extracellular, cancer-specific methylated DNA has been shown to be a prognostic marker when detected in serum or plasma. In this study we investigated the effect of treating cancer cells with differentially methylated CpG DNA. When breast cancer cell lines were treated with methylated CpG DNA, a consistent upregulation of CHAC1 mRNA expression was observed. CHAC1 was recently described to be a novel component of the unfolded protein response pathway. more...

Organism:: Homo sapiens

Type:: Expression profiling by array

Dataset:: GDS4092
Platform:: GPL570
12 Samples

Download data: CEL

Series

Accession:: GSE22865

ID:: 200022865

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 40922.

Breast cancer cell lines treated with methylated or unmethylated DNA oligos

Analysis of breast cancer cell lines BT-20 and Hs578T treated with methylated or un-methylated CpG DNA oligos: CDH13 and ODN 2006. Results provide insight into molecular mechanisms triggered by methylated, but not by unmethylated DNA, that could be involved in tumour biology.

Organism:: Homo sapiens

Type:: Expression profiling by array, transformed count, 4 agent, 2 cell line sets

Platform:: GPL570
Series:: GSE22865
12 Samples

Download data: CEL

DataSet

Accession:: GDS4092

ID:: 4092

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 1000005703.

[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 06, 2012: annotation table updated with netaffx build 32 June 23, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site Complete coverage of the Human Genome U133 Set plus 6,500 additional genes for analysis of over 47,000 transcripts All probe sets represented on the GeneChip Human Genome U133 Set are identically replicated on the GeneChip Human Genome U133 Plus 2.0 Array. more...