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Items: 3

1.

Reconstruction of dynamic regulatory networks reveals signaling-induced topology changes associated with germ layer specification

(Submitter supplied) Elucidating regulatory relationships between transcription factors (TFs) and target genes is fundamental to understanding how cells control their identity and behavior. To overcome the limited scope and scalability of experimental methods in mapping this control, computational GRN reconstruction methods have been developed to infer relationships from transcriptomic data. We developed a new computational GRN reconstruction tool called Epoch, which takes advantage of single-cell RNA sequencing to address a number of shortcomings of existing tools including low precision, low sensitivity, and the limited ability to describe network topology changes over time. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24247
1 Sample
Download data: H5AD
Series
Accession:
GSE177051
ID:
200177051
2.

Illumina NovaSeq 6000 (Mus musculus)

Platform
Accession:
GPL24247
ID:
100024247
3.

d0d4_earlydiff

Organism:
Mus musculus
Source name:
differentiating embryonic stem cells
Platform:
GPL24247
Series:
GSE177051
Download data: H5AD
Sample
Accession:
GSM5373540
ID:
305373540
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db=gds|term=GSM5373540[Accession]|query=1|qty=2|blobid=MCID_67ac926f85cceb1995fc73a2|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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