GSM4968661[Accession] - GEO DataSets - NCBI

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Items: 4

Select item 2001629371.

Profiling of Lsd1 and chromatin marks in epithelial cells overexpressing HOTAIR variants

(Submitter supplied) Epithelial-to-mesenchymal transitions (EMT) underlie a loss of epithelial traits by normal cells during development and neoplastic cells during cancer metastasis. The long noncoding RNA HOTAIR triggers EMT, in part by serving as a scaffold for Polycomb Repressive Complex 2 (PRC2) and thus promoting repressive histone H3 Lys27 methylation. In addition to PRC2, HOTAIR interacts with the Lsd1 lysine demethylase, an epigenetic regulator of cell fate during development and differentiation. more...

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL24676
40 Samples

Download data: GFF

Series

Accession:: GSE162937

ID:: 200162937

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001065172.

HOTAIR lncRNA role in epithelial-mesenchymal transition

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing

Platforms:: GPL16791 GPL24676
68 Samples

Download data: TXT

Series

Accession:: GSE106517

ID:: 200106517

PubMed Full text in PMC Similar studies

Select item 1000246763.

Illumina NovaSeq 6000 (Homo sapiens)

Organism:: Homo sapiens

18321 Series
955298 Samples

Platform

Accession:: GPL24676

ID:: 100024676

Select item 3049686614.

HA5-Early_IgG_P1_CUT&RUN

Organism:: Homo sapiens

Source name:: randomly integrated HOTAIR cDNA deleted for the first 300 bp by lentiviral transduction of HA5-Early cell line (PMID: 23358853)

Platform:: GPL24676
Series:: GSE106517 GSE162937

Sample

Accession:: GSM4968661

ID:: 304968661

SRA Run Selector

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