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Items: 3

1.

Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution

(Submitter supplied) We introduce Chemical-crosslinking Assisted Proximity Capture (CAP-C), a method that utilizes multi-functional chemical crosslinkers with defined physical sizes to directly assess spatial distances between nuclear genomic sequences. CAP-C avoids limitations caused by extensive protein-DNA crosslinking in most in situ methods, and thus generates chromatin contact maps at high resolution with low background noise.
Organism:
Drosophila melanogaster; Homo sapiens; Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other
6 related Platforms
76 Samples
Download data: BIGWIG, HIC, NARROWPEAK, TXT
Series
Accession:
GSE110061
ID:
200110061
2.

Illumina NextSeq 500 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
467 Series
11474 Samples
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Platform
Accession:
GPL19132
ID:
100019132
3.

BL-CAP-C S2 G5 rep1

Organism:
Drosophila melanogaster
Source name:
fruit fly embryos
Platform:
GPL19132
Series:
GSE110061
Download data: HIC
Sample
Accession:
GSM4626620
ID:
304626620
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