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Items: 4

1.

CTCF is required to form regulatory and physical boundaries at limited sites in the Drosophila nervous system

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Drosophila melanogaster
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL17275 GPL21306 GPL23702
33 Samples
Download data: BEDPE, BW, TXT
Series
Accession:
GSE146752
ID:
200146752
2.

CTCF is required to form regulatory and physical boundaries at limited sites in the Drosophila nervous system [Hi-C]

(Submitter supplied) CCCTC-binding factor (CTCF) is a conserved protein able to block communication between regulatory elements and gene promoters in flies and mammals. Here, we studied CTCF function in the Drosophila central nervous system (CNS) in which we find CTCF plays a vital role. Hi-C experiments on dissected larval CNSs of wildtype controls and CTCF[0] mutants that completely lack CTCF revealed that CTCF forms hundreds of physical boundaries in fly chromosomes.
Organism:
Drosophila melanogaster
Type:
Other
Platforms:
GPL23702 GPL21306
8 Samples
Download data: BED, BEDPE
Series
Accession:
GSE146750
ID:
200146750
3.

Illumina HiSeq 4000 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
742 Series
4126 Samples
Download data
Platform
Accession:
GPL21306
ID:
100021306
4.

Hi-C_Wildtype larval CNSs, rep2

Organism:
Drosophila melanogaster
Source name:
third instar larval central nervous system
Platform:
GPL21306
Series:
GSE146750 GSE146752
Download data: BEDPE
Sample
Accession:
GSM4405400
ID:
304405400
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Supplemental Content

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