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Items: 3

1.

TENET 2.0: Identification of key transcriptional regulators and enhancers in lung adenocarcinoma

(Submitter supplied) To better understand the transcriptional regulators involved in the development of lung cancer, we used H3K27ac and open chromatin data to define enhancer regions which may be affected by differential transcriptional regulator activity. Additionally, we performed siRNA knockdown of key transcriptional regulators identified by our study followed by RNA-seq to identify potential downstream target genes of these regulators
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL24676 GPL20301 GPL11154
22 Samples
Download data: BW, NARROWPEAK, TXT
2.

Illumina HiSeq 4000 (Homo sapiens)

Platform
Accession:
GPL20301
ID:
100020301
3.

A549 siControl rep4 RNA-seq

Organism:
Homo sapiens
Source name:
A549 lung adenocarcinoma cell line
Platform:
GPL20301
Series:
GSE143145
Download data: TXT
Sample
Accession:
GSM4250948
ID:
304250948
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