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Items: 3

1.

Dual RNA-seq of zebrafish larvae infected with Shigella sonnei

(Submitter supplied) Shigella flexneri is historically regarded as the primary agent of bacillary dysentery, yet the closely-related Shigella sonnei is replacing S. flexneri, especially in developing countries. The underlying reasons for this dramatic shift are mostly unknown. Using a zebrafish (Danio rerio) model of Shigella infection, we discover that S. sonnei is more virulent than S. flexneri in vivo. Whole animal dual-RNAseq and testing of bacterial mutants suggest that S. more...
Organism:
Danio rerio; Shigella sonnei
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL27764 GPL20828 GPL27763
9 Samples
Download data: TSV
Series
Accession:
GSE140544
ID:
200140544

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina NextSeq 500 (Danio rerio; Shigella sonnei)

Organism:
Shigella sonnei; Danio rerio
1 Series
3 Samples
Download data
Platform
Accession:
GPL27763
ID:
100027763

3.

S. sonnei infected larvae 1

Organism:
Shigella sonnei; Danio rerio
Source name:
pool of 20 S. sonnei infected zebrafish larvae
Platform:
GPL27763
Series:
GSE140544
Download data
Sample
Accession:
GSM4173976
ID:
304173976

SRA Run Selector

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db=gds|term=GSM4173976[Accession]|query=1|qty=3|blobid=MCID_67905c893ebf211704444a19|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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