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Whole Genome Bisulfite sequencing: Allele-specific DNA methylation is increased in cancers and its dense mapping in normal plus neoplastic cells increases the yield of disease-associated regulatory SNPs

(Submitter supplied) Background: Mapping of allele-specific DNA methylation (ASM) can be a post-GWAS strategy for localizing regulatory sequence polymorphisms (rSNPs). However, the advantages of this approach, and the mechanisms underlying ASM in normal and neoplastic cells, remain to be clarified. Results: We performed whole genome methyl-seq on diverse normal cells and tissues and three types of cancers (multiple myeloma, lymphoma, glioblastoma multiforme). more...
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platforms:
GPL20795 GPL24676
85 Samples
Download data: TXT
Series
Accession:
GSE137879
ID:
200137879
3.

Illumina NovaSeq 6000 (Homo sapiens)

Platform
Accession:
GPL24676
ID:
100024676
4.

sample_101_myeloma

Organism:
Homo sapiens
Source name:
myeloma
Platform:
GPL24676
Series:
GSE137879 GSE137880
Download data: TXT
Sample
Accession:
GSM4090866
ID:
304090866
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db=gds|term=GSM4090866[Accession]|query=1|qty=2|blobid=MCID_666d4ff8909a3d46ada5a35f|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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