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Items: 4

1.

Tandem CTCF sites function as insulators to balance spatial chromatin contacts and topological enhancer-promoter selection

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens; Mus musculus
Type:
Expression profiling by high throughput sequencing; Other
4 related Platforms
790 Samples
Download data: BEDGRAPH, FPKM_TRACKING, WIG
Series
Accession:
GSE138646
ID:
200138646
2.

Tandem CTCF sites function as insulators to balance spatial chromatin contacts and topological enhancer-promoter selection [II]

(Submitter supplied) CTCF is a key insulator-binding protein and mammalian genomes contain numerous CTCF-binding sites (CBSs), many of which are organized in tandem arrays. Here we provide direct evidence that CBSs, if located between enhancers and promoters in the clustered Pcdh and b-globin clusters, function as an enhancer-blocking insulator by forming distinct directional chromatin loops, regardless whether enhancers contain CBS or not. more...
Organism:
Mus musculus
Type:
Other
Platform:
GPL21273
44 Samples
Download data: BEDGRAPH
Series
Accession:
GSE136328
ID:
200136328
3.

HiSeq X Ten (Mus musculus)

Platform
Accession:
GPL21273
ID:
100021273
4.

4C_p0_cortex_CBSa_bcd del_rep1

Organism:
Mus musculus
Source name:
cortex neuron
Platform:
GPL21273
Series:
GSE136328 GSE138646
Download data: BEDGRAPH
Sample
Accession:
GSM4046003
ID:
304046003
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Supplemental Content

db=gds|term=GSM4046003[Accession]|query=1|qty=3|blobid=MCID_6675bb3eccfbad768fa6805d|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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