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Items: 3

1.

Comparative transcriptomic and epigenomic analysis identifies key regulators of injury response and neurogenic competence in retinal glia

(Submitter supplied) Injury induces retinal Muller glia of non-mammalian, but not mammalian, vertebrates to generate neurons. To identify gene regulatory networks that control neurogenic competence in retinal glia, we used bulk and single-cell RNA-seq and ATAC-seq analysis to comprehensively profile gene expression and chromatin conformation in Muller glia from zebrafish, chick and mice. This was conducted during glial development, following inner and outer retinal injury, as well as following treatment with extrinsic factors that induce glial reprogramming. more...
Organism:
Mus musculus; Danio rerio
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL20828 GPL19057
145 Samples
Download data: NARROWPEAK, XLSX
Series
Accession:
GSE135406
ID:
200135406
2.

Illumina NextSeq 500 (Danio rerio)

Platform
Accession:
GPL20828
ID:
100020828
3.

zfRNAldN00R1

Organism:
Danio rerio
Source name:
Retina
Platform:
GPL20828
Series:
GSE135406
Download data
Sample
Accession:
GSM4007781
ID:
304007781
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db=gds|term=GSM4007781[Accession]|query=1|qty=3|blobid=MCID_66ec956bb3438a057628621f|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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