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Items: 4

1.

Harnessing natural variation to identify cis regulators of sex-biased gene expression in a multi-strain mouse liver model

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL24247
60 Samples
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Series
Accession:
GSE130914
ID:
200130914
2.

Mouse liver DNase-seq identification of DNase hypersensitive sites (DHS) in male and female mouse liver for two mouse strains: C57BL/6J and CAST/EiJ.

(Submitter supplied) Sequencing files provided here are mouse liver DNase-seq in two mouse strains: C57BL/6J and CAST/EiJ. This is part of a larger study published in PLoS Genetics (2021) "Harnessing natural variation to identify cis regulators of sex-biased gene expression in a multi-strain mouse liver model" that includes RNA-seq and H3K27ac ChIP-seq in mouse liver from the same two strains. This allows us to identify strain-shared ("core") and strain-unique sex-biased genes and enhancers.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL24247
16 Samples
Download data: BED
Series
Accession:
GSE130912
ID:
200130912
3.

Illumina NovaSeq 6000 (Mus musculus)

Platform
Accession:
GPL24247
ID:
100024247
4.

Female_CAST_DNaseI_Repl1_G163_M16

Organism:
Mus musculus
Source name:
Liver
Platform:
GPL24247
Series:
GSE130912 GSE130914
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Sample
Accession:
GSM3756112
ID:
303756112
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