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Items: 4

1.

ATAC-seq and RNA-seq for MDCKII 3D and 2D epithelial morphogenesis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Canis lupus familiaris
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL21400 GPL20988
36 Samples
Download data: BW, TXT
Series
Accession:
GSE129824
ID:
200129824
2.

RNA-seq for MDCKII 3D and 2D epithelial morphogenesis.

(Submitter supplied) We performed time-course RNA-seq experiments for MDCKII 3D cell culture, and included seeding day0 cells and over-confluent 2D cells. To study how intracellular trafficking affects transcriptome changes, we also profiled trancriptome of DENND5A and AVL9 KD MDCKII cells by RNA-seq.
Organism:
Canis lupus familiaris
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL20988 GPL21400
29 Samples
Download data: TXT
Series
Accession:
GSE129823
ID:
200129823
3.

Illumina NextSeq 500 (Canis lupus familiaris)

Organism:
Canis lupus familiaris
30 Series
584 Samples
Download data
Platform
Accession:
GPL21400
ID:
100021400
4.

MDCKII DENND5A-KD2 2D-D4 RNA-seq

Organism:
Canis lupus familiaris
Source name:
MDCKII cells
Platform:
GPL21400
Series:
GSE129823 GSE129824
Download data: TXT
Sample
Accession:
GSM3722673
ID:
303722673
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Supplemental Content

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