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Items: 3

1.

A comprehensive epigenomic analysis of phenotypically distinguishable, genetically identical female and male Daphnia pulex

(Submitter supplied) Background Daphnia species reproduce by cyclic parthenogenesis involving both sexual and asexual reproduction. The sex of the offspring is environmentally determined and mediated via endocrine signalling by the mother. Interestingly, male and female Daphnia can be genetically identical, yet display large differences in behaviour, morphology, lifespan and metabolic activity. Our goal was to integrate multiple omics datasets, including gene expression, splicing, histone modification and DNA methylation data generated from genetically identical female and male Daphnia pulex under controlled laboratory settings with the aim of achieving a better understanding of the underlying epigenetic factors that may contribute to the phenotypic differences observed between the two genders. more...
Organism:
Daphnia pulex
Type:
Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL25991 GPL24021
31 Samples
Download data: FA, GFF, NARROWPEAK, TXT
Series
Accession:
GSE124427
ID:
200124427
2.

Illumina NextSeq 500 (Daphnia pulex)

Organism:
Daphnia pulex
3 Series
31 Samples
Download data
Platform
Accession:
GPL24021
ID:
100024021
3.

WGBS_F_EB31.1

Organism:
Daphnia pulex
Source name:
whole organism
Platform:
GPL24021
Series:
GSE124427
Download data: TXT
Sample
Accession:
GSM3533022
ID:
303533022
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db=gds|term=GSM3533022[Accession]|query=1|qty=2|blobid=MCID_674f58ff68e51b28f57dfae7|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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