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Items: 3

1.

Single cell chromatin immunocleavage sequencing (scChIC-Seq) to profile histone modification

(Submitter supplied) We report a single-cell chromatin immunocleavage sequencing (scChIC-seq) methodology for analyzing histone modifications, which involves targeting of the micrococcal nuclease (MNase) by tethering it to an antibody and selective PCR amplification of cleaved target sites. We show that the protocol reliably detects the H3K4me3 and H3K27me3 target sites in single human white blood cells (WBC), resulting data for successful identification of unique blood cell types based on clustering analysis. more...
Organism:
Mus musculus; Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL13112 GPL21290 GPL21493
425 Samples
Download data: BED, BEDGRAPH, TXT
Series
Accession:
GSE105012
ID:
200105012
2.

Illumina HiSeq 3000 (Homo sapiens)

Platform
Accession:
GPL21290
ID:
100021290
3.

human white blood cells single cells H3K4me3 Ab-Mnase-199

Organism:
Homo sapiens
Source name:
white blood cells
Platform:
GPL21290
Series:
GSE105012
Download data: BED, BEDGRAPH, TXT
Sample
Accession:
GSM3476077
ID:
303476077
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Supplemental Content

db=gds|term=GSM3476077[Accession]|query=1|qty=3|blobid=MCID_662129ae36ac342f8a97de33|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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