U.S. flag

An official website of the United States government

Format
Sort by

Send to:

Choose Destination

Search results

Items: 3

1.

NET-CAGE Characterizes the Dynamics and Topology of Human Transcribed Cis-regulatory Elements

(Submitter supplied) Promoters and enhancers are key cis-regulatory elements, but how they operate to generate cell-type-specific transcriptomes is not fully understood. We developed a simple and robust approach to sensitively detect 5’-ends of nascent RNAs (NET-CAGE) in diverse cells and tissues, including unstable transcripts such as enhancer-derived RNAs. We studied RNA synthesis and degradation at the transcription start site (TSS) level, characterizing the impact of differential promoter usage on transcript stability. more...
Organism:
Homo sapiens; Mus musculus
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL16791 GPL19057
144 Samples
Download data: BED
Series
Accession:
GSE118075
ID:
200118075

PubMed Similar studies SRA Run Selector

2.

Illumina HiSeq 2500 (Homo sapiens)

Organism:
Homo sapiens
12037 Series
347342 Samples
Download data
Platform
Accession:
GPL16791
ID:
100016791

3.

NET-CAGE_MCF-7_2M_biologicalRep4

Organism:
Homo sapiens
Source name:
Breast
Platform:
GPL16791
Series:
GSE118075
Download data: BED
Sample
Accession:
GSM3318147
ID:
303318147

SRA Run Selector

Format
Sort by

Send to:

Choose Destination

Supplemental Content

Filters: Manage Filters

db=gds|term=GSM3318147[Accession]|query=1|qty=3|blobid=MCID_66dc64ceebdbf01cbf29b5ef|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Important Links

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets
Support Center