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Items: 3

1.

Whole exome sequencing analyzed the off-target effect of gene editing through BE3 system.

(Submitter supplied) We used the whole exome sequencing to analyze the off-target effect of base editing system in mouse genomic DNA, which was extracted from haploid stem cells, mouse tails of semi-cloned embryos and mutant pups. The purpose of this sequencing is to find whether there exists off-target effect in the genome. By obtaining over 100 million reads of each sample from WES, we mapped the reads to the reference data base (mm10) and calculated the numbers of SNVs and indels. more...
Organism:
Mus musculus
Type:
Genome variation profiling by high throughput sequencing
Platform:
GPL24247
14 Samples
Download data: VCF
Series
Accession:
GSE115017
ID:
200115017

PubMed Similar studies SRA Run Selector

2.

Illumina NovaSeq 6000 (Mus musculus)

Organism:
Mus musculus
15438 Series
712263 Samples
Download data
Platform
Accession:
GPL24247
ID:
100024247

3.

CI-E3

Organism:
Mus musculus
Source name:
pup_WES
Platform:
GPL24247
Series:
GSE115017
Download data: VCF
Sample
Accession:
GSM3163054
ID:
303163054

SRA Run Selector

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db=gds|term=GSM3163054[Accession]|query=1|qty=2|blobid=MCID_6795ab08f52116069094b657|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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