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Items: 4

1.

Single-cell DNA replication profiling identifies spatiotemporal developmental dynamics of chromosome organization

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other
Platforms:
GPL17131 GPL21273 GPL18480
960 Samples
Download data: BEDGRAPH, BIGWIG, TXT
Series
Accession:
GSE113985
ID:
200113985
2.

Single-cell DNA replication profiling identifies spatiotemporal developmental dynamics of chromosome organization [HiC-seq]

(Submitter supplied) In mammals, chromosomes are partitioned into megabase-sized topologically associating domains (TADs). TADs can be in either A (active) or B (inactive) subnuclear compartments, which correspond to early (E) and late (L) replicating timing (RT) domains, respectively. Here, we show that RT changes are tightly correlated with A/B compartment changes during mouse embryonic stem cell (mESC) differentiation. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL18480
22 Samples
Download data: BEDGRAPH
Series
Accession:
GSE113981
ID:
200113981
3.

Illumina HiSeq 1500 (Mus musculus)

Platform
Accession:
GPL18480
ID:
100018480
4.

CBMS1_rep1_d3_EpiLC_EB_d1

Organism:
Mus musculus
Source name:
CBMS1_d3
Platform:
GPL18480
Series:
GSE113981 GSE113985
Download data: BEDGRAPH
Sample
Accession:
GSM3127757
ID:
303127757
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Supplemental Content

db=gds|term=GSM3127757[Accession]|query=1|qty=2|blobid=MCID_66791969ccfbad768fd9ad09|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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