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Items: 3

1.

Characterizing protein-DNA binding event subtypes in ChIP-exo data

(Submitter supplied) Regulatory proteins associate with the genome either by directly binding cognate DNA motifs or via protein-protein interactions with other regulators. Each genomic recruitment mechanism may be associated with distinct motifs, and may also result in distinct characteristic patterns in high-resolution protein-DNA binding assays. For example, the ChIP-exo protocol precisely characterizes protein-DNA crosslinking patterns by combining chromatin immunoprecipitation (ChIP) with 5’ to 3’ exonuclease digestion. more...
Organism:
Saccharomyces cerevisiae; Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL18573 GPL19756
9 Samples
Download data: BED
Series
Accession:
GSE110502
ID:
200110502
2.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
3.

FoxA1 ChIP-exo replicate 2

Organism:
Homo sapiens
Source name:
MCF-7 cell ChIP-exo
Platform:
GPL18573
Series:
GSE110502
Download data
Sample
Accession:
GSM2994891
ID:
302994891
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Supplemental Content

db=gds|term=GSM2994891[Accession]|query=1|qty=3|blobid=MCID_672bdb1fc619b038bd27ff8a|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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