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Items: 4

1.

Rescue of Fragile X syndrome by DNA methylation editing of the FMR1

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platform:
GPL16791
35 Samples
Download data: BW, COV, TXT, WIG
Series
Accession:
GSE108577
ID:
200108577
2.

Rescue of Fragile X syndrome neurons by DNA methylation editing of the FMR1 gene [methylation]

(Submitter supplied) Fragile X syndrome (FXS), the most common genetic form of intellectual disability in male, is caused by silencing of the FMR1 gene by hypermethylation of the CGG expansion mutation in the 5’UTR region of FMR1 in FXS patients. Here, we applied recently developed DNA methylation editing tools to reverse this hypermethylation event. Targeted demethylation of the CGG expansion by dCas9-Tet1/sgRNA switched the heterochromatin status of the upstream FMR1 promoter to an active chromatin state restoring a persistent expression of FMR1 in FXS iPSCs. more...
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL16791
4 Samples
Download data: COV
Series
Accession:
GSE108171
ID:
200108171
3.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
4.

FXS iPSC_dC-dT_ChIP-BS-seq

Organism:
Homo sapiens
Source name:
FXS iPSCs
Platform:
GPL16791
Series:
GSE108171 GSE108577
Download data: COV
Sample
Accession:
GSM2891655
ID:
302891655
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