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Items: 4

1.

A somatic role for the histone methyltransferase Setdb1 in endogenous retrovirus silencing

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL18480
34 Samples
Download data: BW, TXT
Series
Accession:
GSE102490
ID:
200102490
2.

A somatic role for the histone methyltransferase Setdb1 in endogenous retrovirus silencing [ChIP-Seq]

(Submitter supplied) Subsets of endogenous retroviruses (ERVs) are derepressed in mouse embryonic stem cells (mESCs) deficient for Setdb1, which catalyzes histone H3 lysine 9 trimethylation (H3K9me3). Most of those ERVs, including IAPs, remain silent if Setdb1 is deleted in differentiated embryonic cells; however they are derepressed when deficient for Dnmt1, suggesting that Setdb1 is dispensable for ERV silencing in somatic cells. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL18480
7 Samples
Download data: BED, BW
Series
Accession:
GSE102487
ID:
200102487
3.

Illumina HiSeq 1500 (Mus musculus)

Platform
Accession:
GPL18480
ID:
100018480
4.

H3K9me3_ChIPseq_Setdb1 cKO iMEFs_WT

Organism:
Mus musculus
Source name:
iMEF
Platform:
GPL18480
Series:
GSE102487 GSE102490
Download data: BW
Sample
Accession:
GSM2750487
ID:
302750487
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Supplemental Content

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