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Items: 3

1.

Methyl-Spec-seq control data sets

(Submitter supplied) We developed a novel in-vitro experimental method to characterize the protein-DNA interaction specificity and methylation sensitivity, we called Methyl-Spec-seq. In this data set, mouse ZFP57 (F1-F3) was used as a positive control example to show that Methyl-Spec-seq can determine the relative binding energy for variants with different methylation property, i.e., unmethylated, top hemimethylated, bottom hemimethylated, duplex methylated by either chemical synthesis or enzymatic treatment.
Organism:
Mus musculus
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL16417
6 Samples
Download data: XLSX
Series
Accession:
GSE98542
ID:
200098542
2.

Illumina MiSeq (Mus musculus)

Platform
Accession:
GPL16417
ID:
100016417
3.

CTCF.sample1.bound

Organism:
Mus musculus
Source name:
In vitro protein-DNA binding reactions
Platform:
GPL16417
Series:
GSE98542
Download data
Sample
Accession:
GSM2598430
ID:
302598430
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db=gds|term=GSM2598430[Accession]|query=1|qty=2|blobid=MCID_66706f3e909a3d46ade34e68|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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