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Items: 4

1.

Depletion of tRNA-halves enables effective small RNA sequencing of low-input murine serum samples

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL19057
27 Samples
Download data: TXT
Series
Accession:
GSE88915
ID:
200088915
2.

Small RNA sequencing of serum collected from mice before and after manifestation of tumor

(Submitter supplied) To investigate the effectiveness of performing 5' tRNA half depletion, we evaluated the association of tumor burden on circulating miRNAs present in mouse serum. Three nude mice (NCr) were orthotopically injected with SH-SY5Y human neuroblastoma cells. Serum samples were collected one week before cell injection and two weeks after injection, when mice had palpable tumors. We performed 5' tRNA half depletion using biotinylated probes and streptavidin beads and prepared small RNA libraries using the TruSeq Small RNA Library Prep kit. more...
Organism:
Mus musculus
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL19057
12 Samples
Download data: TXT
Series
Accession:
GSE88728
ID:
200088728
3.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
4.

NCr Mouse 1069. TimePoint 1.tRNA undep

Organism:
Mus musculus
Source name:
Serum, before tumor, undepleted
Platform:
GPL19057
Series:
GSE88728 GSE88915
Download data: TXT
Sample
Accession:
GSM2344866
ID:
302344866
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