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Items: 4

1.

Conserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Trametes coccinea; Trametes cinnabarina; Trametes sanguinea
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL21988 GPL21989 GPL21052
50 Samples
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Series
Accession:
GSE82486
ID:
200082486
2.

Early response of three Pycnoporus species to various carbon sources [Pycnoporus cinnabarinus]

(Submitter supplied) White-rot basidiomycete fungi are potent degraders of plant biomass with the ability to mineralize all lignocellulose components. Recent comparative genomics studies showed that these fungi use a wide diversity of enzymes for wood degradation. Deeper functional analyses are however necessary to understand the enzymatic mechanisms leading to lignocellulose breakdown. In the present study we analyzed the early response of the Polyporales fungi Pycnoporus coccineus CIRM-BRFM310, Pycnoporus cinnabarinus CIRM-BRFM137 and Pycnoporus sanguineus CIRM-BRFM 1264 to various carbon sources including lignocellulosic biomass.
Organism:
Trametes cinnabarina
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21988
17 Samples
Download data: TXT
Series
Accession:
GSE82427
ID:
200082427
3.

Illumina HiSeq 2500 (Trametes cinnabarina)

Organism:
Trametes cinnabarina
2 Series
17 Samples
Download data
Platform
Accession:
GPL21988
ID:
100021988
4.

Pycnoporus cinnabarinus, wheat straw rep2

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
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Sample
Accession:
GSM2191137
ID:
302191137
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