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Items: 3

1.

Capturing pairwise and multi-way chromosomal conformations using C-walks

(Submitter supplied) Chromosomes are folded into highly compacted structures to accommodate physical constraints within nuclei and to regulate access to genomic information. Recently, global mapping of pairwise contacts showed that loops anchoring topological domains (TADs), are highly conserved between cell types and species. Whether pairwise loops synergize to form higher order structures is still unclear. Here we develop a conformation capture approach to study higher order organization using chromosomal walks (C-walks) that link multiple genomic loci together into proximity chains. more...
Organism:
Mus musculus; Homo sapiens
Type:
Other
8 related Platforms
20 Samples
Download data: TXT
Series
Accession:
GSE77553
ID:
200077553
2.

Illumina MiSeq (Homo sapiens)

Platform
Accession:
GPL15520
ID:
100015520
3.

3-way 4C multiplexed library 20 baits (ms_trip_k562_IV)

Organism:
Homo sapiens
Source name:
K-562 cells
Platform:
GPL15520
Series:
GSE77553
Download data
Sample
Accession:
GSM2054415
ID:
302054415
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