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Items: 3

1.

Genome-wide distribution and function of ATP-dependent chromatin remodelers in embryonic stem cells

(Submitter supplied) This study describes the distribution and functional analysis of ATP-dependent chromatin remodelers in mouse 46C ES cells. The remodelers for which ChIP-Seq profiles were generated are Brg1, Chd1, Chd2, Chd4, Chd6, Chd8, Chd9 and Ep400. We first generated ES cell lines expressing individual remodelers fused to an affinity tag at the C-terminus, from their endogenous loci. Remodelers were then formaldehyde-crosslinked to chromatin in vivo, MNase digested to release individual nucleosomes, then immunoprecipitated sequentially with two distinct antibodies against the tag. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
5 related Platforms
44 Samples
Download data: BEDGRAPH, BW, WIG
Series
Accession:
GSE64825
ID:
200064825
2.

Illumina HiSeq 2000 (Mus musculus)

Platform
Accession:
GPL13112
ID:
100013112
3.

Ep400 knockdown MNase-seq replicate 1

Organism:
Mus musculus
Source name:
Ep400 knockdown MNase-seq, ESC
Platform:
GPL13112
Series:
GSE64825
Download data: BW
Sample
Accession:
GSM1941477
ID:
301941477
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