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Items: 3

1.

Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency

(Submitter supplied) Serum-to-2i interconversion of mouse Embryonic Stem Cells (mESCs) is a valuable in vitro model for early embryonic development. To assess whether 3D chromatin organization changes during this transition, we established Capture Hi-C with target-sequence enrichment of DNase I hypersensitive sites. We detected extremely long-range intra- and inter-chromosomal interactions between a small subset of H3K27me3 marked bivalent promoters involving the Hox clusters in serum grown cells. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL19057 GPL13112
76 Samples
Download data: BEDGRAPH, BEDPE, BW, TXT
Series
Accession:
GSE72164
ID:
200072164
2.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
3.

4C_HoxD_bait2_2i

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL19057
Series:
GSE72164
Download data: BEDGRAPH
Sample
Accession:
GSM1908130
ID:
301908130
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Supplemental Content

db=gds|term=GSM1908130[Accession]|query=1|qty=2|blobid=MCID_6750ce878288966b3958e8fc|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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