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Items: 3

1.

ChIPmentation: fast, cheap, low-input ChIP-seq for histones and transcription factors

(Submitter supplied) Chromatin immunoprecipitation followed by next generation sequencing (ChIP-seq) is widely used to map histone marks and transcription factor binding throughout the genome. Here we present ChIPmentation, a method that combines ChIP with sequencing library preparation by Tn5 transposase (“tagmentation”). ChIPmentation introduces sequencing-compatible adapters in a single-step reaction directly on bead-bound chromatin, which reduces time, cost, and input requirements, making ChIPmentation a convenient and high-throughput alternative to existing ChIP-seq protocols.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL11154 GPL16791
87 Samples
Download data: BIGWIG
Series
Accession:
GSE70482
ID:
200070482
2.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
3.

ChIPmentation of 500 thousand K562 cells with H3K4ME3 with 1ul of Tn5 - replicate 1

Organism:
Homo sapiens
Source name:
K562 cells
Platform:
GPL11154
Series:
GSE70482
Download data: BIGWIG
Sample
Accession:
GSM1782753
ID:
301782753
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