GSM171039[Accession] - GEO DataSets

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Items: 3

Select item 2000071181.

Ludwig Institute/UCSD ENCODE project March 2007 Release

(Submitter supplied) The readout of genome information is controlled by transcriptional regulatory elements, but a comprehensive view of the combinatorial control by these DNA sequences, which bind regulatory protein and/or the modified histones in regulating gene transcription, is clearly preliminary. We have developed an experimental strategy for comprehensive determination of such functional elements in human DNA. This strategy involves the application of genome-wide location analysis, also known as ChIP-chip, to a panel of well-characterized regulatory proteins and histones with specific modifications, known to generally associate with transcriptional regulatory elements in vivo. more...

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by genome tiling array

Platforms:: GPL4559 GPL1454
124 Samples

Download data: GPR, PAIR

Series

Accession:: GSE7118

ID:: 200007118

PubMed Full text in PMC Similar studies Pilot ENCODE Analyze with GEO2R

Select item 1000014542.

RenLab ENCODE PCR tiling array

(Submitter supplied) 24,537 non-repetitive sequences that are greater than 100 bps within the 44 ENCODE regions were PCR amplified. All the purified PCR products in a total of 66 384-well plates were spoted on glass slide using a contact printer. There are a total of 48 blocks, with 23 x 23 dimension in each array. Keywords = ENCODE Keywords = PCR tiling array Keywords = Bing Ren

Organism:: Homo sapiens

12 Series
280 Samples

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Platform

Accession:: GPL1454

ID:: 100001454

Select item 3001710393.

TAFII p250 (6B3) GM06990 RenLab ENCODE PCR tiling array replicate 5 ENC1550

Organism:: Homo sapiens

Source name:: Chromatin immunoprecipitated DNA from GM06990 cells using TAFII p250 (6B3) antibody (channel 1) Input DNA from GM06990 cells (channel 2)