GSM1664135[Accession] - GEO DataSets - NCBI

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Items: 3

Select item 2000681221.

New non-coding lytic transcripts derived from the Epstein Barr virus latency origin of replication oriP are hyper-edited, bind the paraspeckle protein, NONO/p54nrb, and support lytic viral transcription

(Submitter supplied) We have previously shown that the Epstein-Barr virus (EBV) likely encodes hundreds of viral long non-coding RNAs (vlncRNAs) that are expressed during reactivation. Here we show that the EBV latency origin of replication (oriP) is transcribed bi-directionally during reactivation and that both leftward (oriPtLs) and rightward transcripts (oriPtRs) are largely localized in the nucleus. While the oriPtLs are most likely non-coding, at least some of the oriPtRs contain the BCRF1/vIL10 open reading frame. more...

Organism:: human gammaherpesvirus 4

Type:: Expression profiling by high throughput sequencing

Platform:: GPL20090
16 Samples

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Series

Accession:: GSE68122

ID:: 200068122

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000200902.

Illumina HiSeq 2000 (Human herpesvirus 4)

Organism:: human gammaherpesvirus 4

1 Series
16 Samples

Platform

Accession:: GPL20090

ID:: 100020090

Select item 3016641353.

RNA-seq of induced oriPtL knockdown Akata cells (using GapmeR 2 for knockdown)_3

Organism:: human gammaherpesvirus 4

Source name:: EBV-infected B cells

Platform:: GPL20090
Series:: GSE68122

Sample

Accession:: GSM1664135

ID:: 301664135

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GSM1664135[Accession] (3)
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