GSM1659605[Accession] - GEO DataSets - NCBI

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Items: 3

Select item 2000679551.

The landscape of global-long range interactions in mouse and human blood cell lines mediated by Yy1, GATA1, and CTCF during differentiation

(Submitter supplied) Abstract: A network of interactions between functional DNA elements regulates gene expression in a precise spatio-temporal pattern during development. This regulation is implemented through many-to-many looping interactions of DNA elements mediated by specific transcription factors such as Ctcf, Gata1 and Yy1. We carried out RNA polymerase II ChIA-PET and DNase-seq in Mouse Erythroleukemia (MEL) cells to capture genomewide changes in the resulting chromatin interaction graphs (CIGs) during DMSO-induced hemoglobin activation. more...

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other

Platforms:: GPL19057 GPL13112
18 Samples

Download data: BED, TXT

Series

Accession:: GSE67955

ID:: 200067955

SRA Run Selector

Select item 1000131122.

Illumina HiSeq 2000 (Mus musculus)

Organism:: Mus musculus

8387 Series
189283 Samples

Platform

Accession:: GPL13112

ID:: 100013112

Select item 3016596053.

Organism:: Mus musculus

Source name:: MEL

Platform:: GPL13112
Series:: GSE67955

Download data: TXT

Sample

Accession:: GSM1659605

ID:: 301659605

SRA Run Selector

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