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Items: 3

1.

Rlf, a widely-spaced zinc finger protein, is involved in maintaining epigenetic marks at CpG island shores and enhancer elements across the genome

(Submitter supplied) We recently identified a novel protein, Rearranged L-myc fusion (Rlf), that is required for DNA hypomethylation (and transcriptional activity) at certain regions of the mouse genome known to be sensitive to epigenetic gene silencing. Here we report the analysis of 12 whole genome bisulphite sequencing datasets across three different embryonic tissues/stages from mice with and without Rlf. We find that its absence has effects at thousands of differentially methylated regions.
Organism:
Mus musculus
Type:
Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL19057 GPL13112
22 Samples
Download data: BW, TAB
Series
Accession:
GSE58108
ID:
200058108
2.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
3.

H3K4me1 ChIPseq - wild2

Organism:
Mus musculus
Source name:
E14.5 Liver
Platform:
GPL19057
Series:
GSE58108
Download data: BW
Sample
Accession:
GSM1568493
ID:
301568493
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