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Items: 3

1.

Genome-wide analysis of intracellular notch1(ICN1) targets in gamma delta T cells (gd T cells).

(Submitter supplied) We performed chromatin immunoprecipitation followed by high-throughput DNA sequencing (ChIP-seq) for ICN1 in thymic gd T cells from neonates of C57BL/6 mice. Sequence reads for ICN1 and Input were aligned with the mouse reference genome (mm10) by bowtie program (v1.0.0), and peak detection and identification of ICN1 binding sites were obtained with MACS program (v1.4.2). ChIP-seq data revealed that 12%, 6% and 47% of ICN1 binding sites were within -10kb upstream of transcription start site, +10kb downstream of 3'end and the bodies of genes, respectively. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL18480
2 Samples
Download data: BED
Series
Accession:
GSE56756
ID:
200056756
2.

Illumina HiSeq 1500 (Mus musculus)

Platform
Accession:
GPL18480
ID:
100018480
3.

gamma8-Notch

Organism:
Mus musculus
Source name:
Primary gd T cells
Platform:
GPL18480
Series:
GSE56756
Download data: BED
Sample
Accession:
GSM1368207
ID:
301368207
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Supplemental Content

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